Prions

From: A van Gelder (cardiac@icon.co.za)
Date: Sat Dec 02 2000 - 11:02:30 GMT

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    From: A van Gelder <cardiac@icon.co.za>
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    Scott Chase asked:
    >
    > As a molecular entity, the prion is quite bizarre. What exactly is it?
    > What's its modus operandi?
    >

    I am no expert on prions but offer the following as what may be an
    interesting aside for some. If there is further interest I will do some
    reading and come up with a more complete picture unless an expert comes
    up with a better explanation beforehand.

    When I was a medical student a few decades ago we were taught virusses
    were inanimate. Heck, you could even crystalyze "it"! At that time, the
    main scientific mental model of a virus was still some "thing" existing
    in a fluid that could be "filtered" through a membrane small enough to
    stop all known bacteria some textbooks still referred to "filterable
    virus" (singular), neatly coupled with electron micrographs of neat
    little hexagons of viral "bodies" (never called "corpses" I seem to
    recall.

    Now we routinely "kill" virusses and we have in mind a quite complex
    "organism" consisting of nucleic acid wearing a protein cloak, even
    enzyme systems to help it along in its jumping act between bigger
    organisms.

    Now prions are "inanimate" (!) bits of protein that have the funny
    property to interfere with the process of "folding" of protein
    molecules. You see, the idea that the DNA sequence first translated into
    RNA, selecting amino acids which are then assembled on ribosomes into
    the sequence expressed by triads of nucleic acid subgroups has not been
    sufficient to explain the very complex "folding" that the assembled
    protein molecule undergoes during or soon after this assembly process.
    And, it is the shape of the protein molecule that determines which bits
    are attractive to bits of other protein molecules and where they then
    stick together, or repulse another. (And you thought it was LOVE making
    the world go round!)

    Prions seem to either act as faulty templates for proteins to fold
    against (also in the process incidently making more prions), or to
    damage the endoplasmic reticulum where this protein-folding is taking
    place. The end result is that the protein being synthesized has an
    abnormal shape, if not amino-acid sequence, causing it to polymerize
    into denser pieces. It is this abnormal protein that does not work and
    cannot be broken down or ejected from the cells that leads to cell
    damage and death (in neural cells) with the spongy areas of destruction
    in the final condition.

    As far as the indestructible properties of prions are concerned this is
    likely to be very relative, sterilization procedures are designed to
    kill bacteria (and viri) without destroying the material being
    sterilized. Pasteurization is an extreme example where bacterial protein
    components are destroyed by heat, without "cooking" the protein in the
    milk. Cooked milk may be viewed foating on the surface in some coffee
    shops.
    Also, not all protein eaten is degraded to the level of amino acid or
    polypeptide (a very short chain of amino acids) by intestinal enzymes.
    Food allergy (eg hives after certain forms of sea food) is due to the
    absorbtion by normal gut of fully fledged protein molecules. So there is
    no need to postulate "special" routes or properties of "infection" by
    prions. Absorbtion is likely to be related to the amount ingested which
    is the basis for the UK recommendation to remove all contact between
    neural tissue and the meat being sold, so removing the spinal cord
    together with the enclosed bony spinal column from the human food chain.
    Of course Creutzfeld Jacob disease has been said to be transferred
    during the transplantation of human corneas.

    The suggestion that a very small intake could lead to a small number of
    molecules finding their way to the brain, and then just taking longer to
    get to the point where sufficient damage is done to recognize the
    disease is the basis for the concern of "long incubation Creutzfeld
    Jacob Disease (CJD)as opposed to Juvenile CJD.

    Of course, there is another school of thought that considers the
    Juvenile Creutzfeld Jacob cases in the UK to be close to the natural
    mutation rate of the genes influencing all this folding - - - -

    Antoine van Gelder snr

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