From: Chris Taylor (chris.taylor@ebi.ac.uk)
Date: Fri 28 Oct 2005 - 14:52:14 GMT
Yeah I think that's a fair summary. The plant thing is a 
nightmare though, predominantly because the buggers don't have 
to run around, so all the things like modern maize and bread 
wheat etc. could in some senses be said to actually be two 
species at once, halfway to a lichen or something like that 
almost, often resulting in thickening of stems and increase in 
yield that would be rather detrimental to the average animal 
(double up those tendons...).
I hadn't come across 'compilospecies' before (I, like most 
biology types I suppose suffer from the predisposition towards 
animal biology); it's a nice concept.
Certainly I would agree that pure ecological selection is not a 
major driver; although specialisation is a strong effect, for 
example for insecty-type things inter alia. My problem was 
mostly based on the role of reinforcement in shifting things 
from isolation acting through the F1 or F2 to something that 
stops interbreeding in the first place (just one factor though 
along with ecological effects and lots of other stuff).
Sorry for going off on one :)
Cheers, Chris.
John Wilkins wrote:
> As I understand it, and I am neither a botanist nor a geneticist, but  I 
> have read a fair bit of the speciation literature, plant speciation  is 
> massively due to allopolyploidy - in ferns and fern allies  
> (gymnosperms), it has been estimated as much as 97% of species are  
> formed either from auto- or allopolyploidy, and angiosperms around  75% 
> (but Coyne and Orr reject this figure, offered by people like  Verne 
> Grant and Warren H Wagner, in favour of their preferred  allopatric 
> model based on the reproductive isolation concept of  species 
> misleadingly called the "biological" species concept).
> 
> Sergey Gavrilet's book on speciation does point out that there is a  
> definitional problem with the allopatric model - it ranges from 100%  
> sympatric to 100% allopatric, but mostly demes and gene pools are in  
> some kind of parapatry. However, the standard view is that  reinforcing 
> selection against hybrids is post-speciation rather than  a cause of it. 
> Moreover there are numerous cases, particularly in  flowering plants, of 
> introgression between good species. So much so  that the Botanical 
> conventions allow for a term  "compilospecies" (plundering species) for 
> species that continuously  introduce genetic material from nearby 
> species without losing their  integrity as taxa.
> 
> As to species concepts - there are, WRT speciation, really only two  
> concepts here that matter - one presumes reproductive isolation for  
> sexual species (the phylogenetic concept; actually there are three,  but 
> one of them is more a diagnostic concept than an ontological  one), and 
> the other treats reproductive isolation for sexuals as the  definition 
> of specieshood. For asexuals (well, for primarily asexual  taxa, like 
> protists that are not gene exchangers) the relevant  concept is *all* 
> about selection.
> 
> There's a lack of hard evidence about relative rates. So far most of  
> the discussions have been about the conditions under which the  realtive 
> kinds occur, and the problem is that we cannot say without  
> investigation - that is, not a priori or on theoretical grounds - how  
> often those conditions occur. Coyne and Orr tend to assume that the  
> sexual cases are common, and so assert that allopatric speciation is  
> common. Gavrilets, Schilthuizen, Berlocher and others offer cingular  
> cases or theoretical arguments as counters. But we simply do not  know; 
> and it is a theoretically hard domain to find this out.
> 
> For myself, I think that most sexual speciation that is not  polyploidy 
> (and in this I include partial polyploidy like karyotypic  difference, 
> as in the "stasipatric" speciation MJD White proposed  back in the 70s) 
> is allopatric or at the allo end of parapatric, and  mostly due to 
> contingent evolution. But this might end up the  equivalent of saying 
> that only a small proportion of *all* speciation  is allopatric. In any 
> case, little of the speciation process will  turn out to be due to 
> ecological selection. A lot will turn out to be  due to accidental (that 
> is, selectively uncorrelated), and some as  yet undetermined proportion 
> will be due to sexual selection (runaway  superstimulus selection).
> 
> Hope this helps, rather than hinders.
> 
> On 28/10/2005, at 10:07 PM, Chris Taylor wrote:
> 
>> Hmm. I get what you're saying but this comes down to definitions of  
>> species (and by extension, speciation) really. The inability to  
>> interbreed at all where that occurs is often a product of drift/ 
>> rearrangements/founder, and of course directional _selection_, but  it 
>> is the 'no role in most cases' thing I take issue with; consider  the 
>> plants that form (almost continuous) sequences of whatever-you- 
>> want-to-call-them; allochronic flowering or divergence of flower  
>> structure is absolutely selected for and fairly rarely is there  
>> complete isolation. Also consider parapatric in animals rather than  
>> sympatric -- at the boundary there is definitely reinforcement  under 
>> selection by call/smell/shape of bits or whatever to prevent  gene 
>> flow (driven obviously by the drift/rearrangements/dir.sel. in  the 
>> bulk of the population), without which no true speciation could  be 
>> said to have occurred.
>>
>> Full-on allopatric is fine, but even then when the species come  back 
>> into contact reinforcement shows its head to avoid fruitless  matings 
>> (under selection), and reinforcement is pure selection.  _Drift_ in 
>> flowering time (for example) could have the same effect  though of 
>> course.
>>
>> Anyway it was not the substance I took issue with, rather the  degree 
>> (which I have to admit is hard to characterise).
>>
>> Hair-splitters Inc.  :\
>>
>> Cheers, Chris.
>>
>>
>> John Wilkins wrote:
>>
>>> Most speciation is thought to occur through geographical  isolation  
>>> and subsequent evolution, mostly by drift, founder  effect sampling 
>>> of  the original gene pool and selection for local  adaptation. But 
>>> the  selection here is not speciating selection  most of the time.  
>>> Speciation is a by-product of evolution of the  isolate population  
>>> that results in reproductive isolation when  back in sympatry.
>>> The type of speciation in which selection plays a role *in  causing  
>>> speciation* is sympatric speciation. In this case  variants within a  
>>> local population adapt to divergent fitness  peaks, and so results 
>>> in  divergent selection, leading to lowered  fitness of hybrids. But 
>>> most  of the time this is caused more by  sexual selection than 
>>> ecological  adaptation. And it requires  quite rare circumstances.
>>> Darwin thought that most speciation was caused by divergent  
>>> selection  but it seems not, at least in sexual organisms, to be a  
>>> major factor.  Selection causes adaptation, but adaptation doesn't  
>>> drive most  speciation events.
>>> On 28/10/2005, at 7:28 PM, Chris Taylor wrote:
>>>
>>>>> But of course most speciation now is in fact thought to occur   
>>>>> through  random variation and random fixation rather than by   
>>>>> selection as  Darwin thought. There's good reason to think that   
>>>>> some speciation is  due to selection, but not much. I worry  that  
>>>>> we think only that  Darwinian evolution is about  selection  
>>>>> (natural or sexual), when in  fact another really  deep aspect of  
>>>>> his view is common descent, and  this is not  tied now to selection.
>>>>>
>>>>>
>>>>
>>>> ???
>>>>
>>>> Selection has _no role_ in the generation of species the  majority  
>>>> of the time? Are you just purely talking about  permanent absolute  
>>>> allopatry / completely discrete allochrony or  whatever equivalent  
>>>> you care to pick?
>>>>
>>>> Elephants and fleas will never successfully mate (having  diverged  
>>>> somewhat); but where this matters (i.e. in recent  speciation  
>>>> events, where those species ranges [or whatever]  overlap) 
>>>> selection  is key in ensuring that hybrids are (1)  demonstrably 
>>>> crap and that  (2) parents who find a way to avoid  sinking their 
>>>> genes into such  crappy hybrids propagate more of  those genes 
>>>> forwards to subsequent  generations..?
>>>>
>>>> Random variation and fixation is _not good_ at producing  
>>>> adaptation  without selection. Have I misunderstood you?
>>>>
>>>> Cheers, Chris.
>>>>
>>>> ~~~~~~~~~~~~~~~~~~~~~~~~
>>>>  chris.taylor@ebi.ac.uk
>>>>  http://psidev.sf.net/
>>>> ~~~~~~~~~~~~~~~~~~~~~~~~
>>>>
>>>>
>>>>
>>>> ===============================================================
>>>> This was distributed via the memetics list associated with the
>>>> Journal of Memetics - Evolutionary Models of Information  Transmission
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>>>>
>>>>
>>>>
>>
>> -- 
>> ~~~~~~~~~~~~~~~~~~~~~~~~
>>  chris.taylor@ebi.ac.uk
>>  http://psidev.sf.net/
>> ~~~~~~~~~~~~~~~~~~~~~~~~
>>
>> ===============================================================
>> This was distributed via the memetics list associated with the
>> Journal of Memetics - Evolutionary Models of Information Transmission
>> For information about the journal and the list (e.g. unsubscribing)
>> see: http://www.cpm.mmu.ac.uk/jom-emit
>>
>>
> 
-- ~~~~~~~~~~~~~~~~~~~~~~~~ chris.taylor@ebi.ac.uk http://psidev.sf.net/ ~~~~~~~~~~~~~~~~~~~~~~~~ =============================================================== This was distributed via the memetics list associated with the Journal of Memetics - Evolutionary Models of Information Transmission For information about the journal and the list (e.g. unsubscribing) see: http://www.cpm.mmu.ac.uk/jom-emit
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